Thank you for your private message and for confirming that the deletions were intentional.

The message "No primary map features!?" indicates that several objects were removed that did not have any primary tags (as defined here: https://wiki.openstreetmap.org/wiki/Map_features) - at least as interpreted by my tools during processing.

However, please avoid deleting features with the intention of redrawing them later. It's generally better to make improvements directly to the existing data whenever possible.

Best regards.