Right, in Kalmar there were some duplicates as I was working on the new PT route. They were next on my list as I didn't wanna remove previous data before adding new data as it might be seen as vandalism.
But the rest of the way to Nybro, those stations lacked duplicates but were removed anyway.

Did I misunderstand the wiki article on how to place the bus stops off to the side of the road where the stop is located? I tried following the wiki as well as how PT was done in the Stockholm area. Those looked like a match and a good frame of reference.