feature-docm: DocmIndexer adapted to last EvidenceEntry - FeatureTypes modification
@@ -153,11 +153,11 @@ public class DOCMIndexer extends ClinicalIndexer {
if (map.containsKey(TRANSCRIPT)) {
String symbol = (String) map.get(TRANSCRIPT);
if (symbol.startsWith(ENST)) {
- genomicFeatureList.add(new GenomicFeature(FeatureTypes.Transcript, symbol, null));
+ genomicFeatureList.add(new GenomicFeature(FeatureTypes.transcript, symbol, null));
} else {
Map<String, String> transcriptMap = new HashMap<>(1);
map.put(SYMBOL, gene);
- genomicFeatureList.add(new GenomicFeature(FeatureTypes.Transcript, null, transcriptMap));
+ genomicFeatureList.add(new GenomicFeature(FeatureTypes.transcript, null, transcriptMap));
}
}
return genomicFeatureList;
