Help for merging
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- <title>Extract scans - Spectra/mass list to csv export</title>
+ <title>Merge raw data files</title>
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- <h1>Extract scans - Spectra/mass list to csv export</h1>
+ <h1>Merge raw data files</h1>
<h2>Description</h2>
<p>
- This module exports scans or mass lists to csv text files.
+ This module merges all raw data files into a new. For example to combine positive and negative scans with MS2, all from different raw data files.
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<h4>Method parameters</h4>
<dl>
- <dt>Optional mass list: </dt>
- <dd>If checked, mass lists are exported instead of raw scans</dd>
- <dt>Raw data files: </dt>
- <dd>One or more raw data files that contain the scans/mass lists</dd>
- <dt>Use center time: </dt>
- <dd>Specifies that the center time and scan count should be used (inactive in the case that auto search max is selected)</dd>
- <dt>Scan count to be exported: </dt>
- <dd>Only used for center time and for auto search max</dd>
- <dt>Center time: </dt>
- <dd>Used if option above is checked and auto max is disabled</dd>
- <dt>Time range:</dt>
- <dd>Time range to export scans. Only used if use center time and auto search max is unchecked</dd>
- <dt>Auto search max: </dt>
- <dd>Searches for TIC maximum to center the scan export of the specified count of scans. (Important: Disables the center time and time range)</dd>
- <dt>Export header: </dt>
- <dd>Export meta data as a header for each scan</dd>
+ <dt>Data files: </dt>
+ <dt>Mode: </dt>
+ <dd>MERGE PATTERN: Merge files based on a grouping identifier which can be a name suffix or prefix. (e.g., Sample_A_1, Sample_B_1: Use AFTER LAST _ to combine these files)</dd>
+ <dd>MERGE SELECTED: Merge all selected files to a new</dd>
+ <dt>Grouping identifier position: </dt>
+ <dd>Search for the specific group identifier before the first or after the last marker.</dd>
+ <dt>Position marker: </dt>
+ <dd>The marker that splits the specific group identifier from the rest of the file names</dd>
+ <dt>MS2 marker: </dt>
+ <dd>String that marks a raw data file as a source of MS2 (MSn) scans. All MS1 scans of this file are discarded. (e.g., MS2, TOP4, ...)</dd>
+ <dt>Suffix:</dt>
+ <dd>Suffix to be added to the file name</dd
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