feature-hgvs: new example test added. Needs fixing
@@ -59,7 +59,12 @@ public class HgvsCalculatorTest extends GenericMongoDBAdaptorTest {
// There may be more than these, but these 4 are the ones that I can actually validate
// assertThat(hgvsList, CoreMatchers.hasItems("ENSP00000369438:p.Cys105_Cys109del"));
- List<String> hgvsList = getVariantHgvs(new Variant("21", 46074291, "ACAAA", "-"));
+ List<String> hgvsList = getVariantHgvs(new Variant("21", 46074460, "GGT", "-"));
+ assertEquals(3, hgvsList.size());
+ // There may be more than these, but these 4 are the ones that I can actually validate
+ assertThat(hgvsList, CoreMatchers.hasItems("ENSP00000375476.1:p.Thr24del"));
+
+ hgvsList = getVariantHgvs(new Variant("21", 46074291, "ACAAA", "-"));
assertEquals(3, hgvsList.size());
// There may be more than these, but these 4 are the ones that I can actually validate
assertThat(hgvsList, CoreMatchers.hasItems("ENSP00000375476:p.Leu80fs"));
