add ExAC scores
@@ -298,12 +298,16 @@ public class GeneParserUtils {
String oeMis = parts[5];
String oeSyn = parts[14];
String oeLof = parts[24];
+ String exacPLI = parts[70];
+ String exacLof = parts[73];
String geneIdentifier = parts[64];
List<Constraint> constraints = new ArrayList<>();
addConstraint(constraints, "oe_mis", oeMis);
addConstraint(constraints, "oe_syn", oeSyn);
addConstraint(constraints, "oe_lof", oeLof);
+ addConstraint(constraints, "exac_pLI", exacPLI);
+ addConstraint(constraints, "exac_oe_lof", exacLof);
transcriptConstraints.put(transcriptIdentifier, constraints);
if ("TRUE".equalsIgnoreCase(canonical)) {
