server: initialize trancript, variant and protein managers
@@ -57,7 +57,6 @@ public class GeneWSServer extends GenericRestWSServer {
private TranscriptManager transcriptManager;
private VariantManager variantManager;
private ProteinManager proteinManager;
- private TfbsManager tfbsManager;
public GeneWSServer(@PathParam("apiVersion") @ApiParam(name = "apiVersion", value = ParamConstants.VERSION_DESCRIPTION,
defaultValue = ParamConstants.DEFAULT_VERSION) String apiVersion,
@@ -77,10 +76,9 @@ public class GeneWSServer extends GenericRestWSServer {
assembly = SpeciesUtils.getDefaultAssembly(cellBaseConfiguration, species).getName();
}
geneManager = cellBaseManagerFactory.getGeneManager(species, assembly);
-// transcriptManager = cellBaseManagerFactory.getTranscriptManager(species, assembly);
-// variantManager = cellBaseManagerFactory.getVariantManager(species, assembly);
-// proteinManager = cellBaseManagerFactory.getProteinManager(species, assembly);
-// tfbsManager = cellBaseManagerFactory.getTFManager(species, assembly);
+ transcriptManager = cellBaseManagerFactory.getTranscriptManager(species, assembly);
+ variantManager = cellBaseManagerFactory.getVariantManager(species, assembly);
+ proteinManager = cellBaseManagerFactory.getProteinManager(species, assembly);
}
@GET
