Added abundance column in mztab-m export
@@ -241,11 +241,13 @@ public class MZTabmExportTask extends AbstractTask {
String peakRT = String.valueOf(peak.getRT());
String peakHeight = String.valueOf(peak.getHeight());
Double peakArea = peak.getArea();
+ System.out.println(peakArea);
sm.addOptItem(peak_mzList.get(dataFileCount-1).build(peakMZ));
sm.addOptItem(peak_rtList.get(dataFileCount-1).build(peakRT));
sm.addOptItem(peak_heightList.get(dataFileCount-1).build(peakHeight));
- //TODO setAbundanceColumnValue
+ sm.addAbundanceAssayItem(peakArea);
+
}
}
}
