User dockerRoot instead of manual symlinking for the Cloud Pipeline Cromwell provider config
@@ -6,6 +6,10 @@ docker {
}
}
+call-caching {
+ enabled = false
+}
+
backend {
default = "CloudPipeline"
@@ -27,12 +31,15 @@ backend {
submit = "/bin/bash ${script}"
submit-docker = """
- pipe_exec_task -e -c \
- "ln -s /common/cromwell-executions /cromwell-executions; bash ${script}" \
- -d "${docker}" -t "${job_name}" -p $RUN_ID
+ pipe_exec_task -e \
+ -c "bash ${script}" \
+ -d "${docker}" \
+ -t "${job_name}" \
+ -p $RUN_ID
"""
root = "/common/cromwell-executions"
+ dockerRoot = "/common/cromwell-executions"
filesystems {
